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“Bayesian Total-Evidence Dating Reveals the Recent Crown Radiation of Penguins.” Systematic Biology 66 (1): 57–73.
“Inferring Ancestral Recombination Graphs from Bacterial Genomic Data.” Genetics 205 (2): 857–70.
2016 "Bayesian inference of ancestral recombination grpahs for bacterial populations" bio Rxiv Ogilvie, Huw A., Joseph Heled, Dong Xie, and Alexei J.
“Computational Performance and Statistical Accuracy of *BEAST and Comparisons with Other Methods.” Systematic Biology 65 (3): 381–96.
In 2017, the Cat Classification Task Force of the Cat Specialist Group assigned the lion populations in Asia and West, Central and North Africa to Panthera leo leo, and the lion populations in Southern and East Africa to Panthera leo melanochaita.
Previous studies, which were focused mainly on lions from eastern and southern parts of Africa, already showed these can be possibly divided in two main clades: one to the west of the Great Rift Valley and the other to the east.
We include a simple to use user-interface program for setting up standard analyses and a suit of programs for analysing the results. X (currently version These tutorials use the graphical applications of BEAST to perform analyses using the provided example files: Tutorial 1: Using sequences sampled at different points in time to estimate rates Tutorial 2: Estimating the divergence time of a monophyletic group using a known mutation rate And more Tutorials available.
Some downloadable packages containing tutorial worksheets and associated data. The recommended citation for this program is: Drummond AJ, Suchard MA, Xie D & Rambaut A (2012) Bayesian phylogenetics with BEAUti and the BEAST 1.7 Molecular Biology And Evolution 29: 1969-1973 full text See this page for a more detailed list of publications for citing individual models and components.
Five decades have passed since the proposal of the molecular clock hypothesis, which states that the rate of evolution at the molecular level is constant through time and among species.
This hypothesis has become a powerful tool in evolutionary biology, making it possible to use molecular sequences to estimate the geological ages of species divergence events.